Peer-Reviewed Publications

Saturday, January 1, 2011

Alginates as biomaterials in tissue engineering

Andersen, T., Strand, B., Formo, K., Alsberg, E., & Christensen, B. (2011). Alginates as biomaterials in tissue engineering. CARBOHYDRATE CHEMISTRY: CHEMICAL AND BIOLOGICAL APPROACHES, VOL 37, 37 (), 227-258.

Saturday, January 1, 2011

Amplitude-Scaled versus Spectrum-Matched Ground Motions for Seismic Performance Assessment

Heo, Y., Kunnath, S., & Abrahamson, N. (2011). Amplitude-Scaled versus Spectrum-Matched Ground Motions for Seismic Performance Assessment. Journal of Structural Engineering-Asce, 137 (3), 278-288.

Saturday, January 1, 2011

An integrated texton and bag of words classifier for identifying anaplastic medulloblastomas.

Galaro, J., Judkins, A., Ellison, D., Baccon, J., & Madabhushi, A. (2011). An integrated texton and bag of words classifier for identifying anaplastic medulloblastomas.. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2011 (), 3443-6.

Saturday, January 1, 2011

An understanding of the width effect in FRP--concrete debonding

Subramaniam, K., Carloni, C., & Nobile, L. (2011). An understanding of the width effect in FRP--concrete debonding. Strain, 47 (2), 127--137.

Saturday, January 1, 2011

Analysis of cell cycle dynamics using probabilistic cell cycle models

Gurkan-Cavusoglu, E., Schupp, J., KInsella, T., & Loparo, K. A. (2011). Analysis of cell cycle dynamics using probabilistic cell cycle models. , (), 141–144.

Saturday, January 1, 2011

Application of belief propagation to trust and reputation management

Ayday, E., & Fekri, F. (2011). Application of belief propagation to trust and reputation management. , (), 2173--2177.

Saturday, January 1, 2011

Application of belief propagation to trust and reputation management

Ayday, E., & Fekri, F. (2011). Application of belief propagation to trust and reputation management. , (), 2173--2177.

Saturday, January 1, 2011

Automated and adaptable quantification of cellular alignment from microscopic images for tissue engineering applications

Xu, F., Beyazoglu, T., Hefner, E., Gurkan, U., & Demirci, U. (2011). Automated and adaptable quantification of cellular alignment from microscopic images for tissue engineering applications. Tissue Engineering Part C: Methods, 17 (6), 641–649.

Saturday, January 1, 2011

Automated vector selection of SIVQ and parallel computing integration MATLAB™: Innovations supporting large-scale and high-throughput image analysis studies.

Cheng, J., Hipp, J., Monaco, J., Lucas, D., Madabhushi, A., & Balis, U. (2011). Automated vector selection of SIVQ and parallel computing integration MATLAB™: Innovations supporting large-scale and high-throughput image analysis studies.. Journal of pathology informatics, 2 (), 37.

Saturday, January 1, 2011

Automatic segmentation of intravascular optical coherence tomography images for facilitating quantitative diagnosis of atherosclerosis

Wang, Z., Kyono, H., Bezerra, H., Wilson, D. L., Costa, M., & Rollins, A. M. (2011). Automatic segmentation of intravascular optical coherence tomography images for facilitating quantitative diagnosis of atherosclerosis. Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine Xv, 7889 ().

Saturday, January 1, 2011

Basal lamina secreted by MDCK cells has size- and charge-selective properties.

Ferrell, N., Groszek, J., Li , L., Smith, L., Butler, R., Zorman, C., ... Fissell, W. (2011). Basal lamina secreted by MDCK cells has size- and charge-selective properties.. American journal of physiology. Renal physiology, 300 (1), F86-90.

Saturday, January 1, 2011

Brain Rhythms Reveal a Hierarchical Network Organization

Steinke, G., & Galána, R. (2011). Brain Rhythms Reveal a Hierarchical Network Organization. PLOS COMPUTATIONAL BIOLOGY, 7 (10).

Saturday, January 1, 2011

Brain rhythms reveal a hierarchical network organization

Steinke, G., & Galána, R. (2011). Brain rhythms reveal a hierarchical network organization. PLoS Comput Biol, 7 (10), e1002207.

Saturday, January 1, 2011

Cellularity of scaffold-free engineered cartilage is depth dependent

Whitney, G., Mansour, J. M., & Dennis, J. (2011). Cellularity of scaffold-free engineered cartilage is depth dependent. Case Orthopaedic Journal, 8(1), 29-31 ().

Saturday, January 1, 2011

Clean-room and {CO2-Laser} Processing of Ultra {High-Purity} {Al2O3}

French, R. H., & Coble, R. (2011). Clean-room and {CO2-Laser} Processing of Ultra {High-Purity} {Al2O3}. Research Gate, ().

Saturday, January 1, 2011

Commun Nonlinear Sci Numer Simulat

Liu, C., Wang, J., Yu, H., Deng, B., Wei, X., Li, H., ... Fietkiewicz, C. (2011). Commun Nonlinear Sci Numer Simulat. , ().

Saturday, January 1, 2011

Compliant Bodies Provide Increased Agility in Mobile Robots

Kern, N., Bachmann, R., Triolo, R., & Quinn, R. D. (2011). Compliant Bodies Provide Increased Agility in Mobile Robots. IEEE/RSJ Conference on Intelligent Robots and Systems, ().

Saturday, January 1, 2011

Computer aided diagnostic tools aim to empower rather than replace pathologists: Lessons learned from computational chess.

Hipp, J., Flotte, T., Monaco, J., Cheng, J., Madabhushi, A., Yagi, Y., ... Balis, U. (2011). Computer aided diagnostic tools aim to empower rather than replace pathologists: Lessons learned from computational chess.. Journal of pathology informatics, 2 (), 25.

Saturday, January 1, 2011

Conformal Thin Film Packaging for SiC Sensor Circuits in Harsh Environments

Scardelletti, M., Karnick, D., Ponchak, G., & Zorman, C. (2011). Conformal Thin Film Packaging for SiC Sensor Circuits in Harsh Environments. , (), 53-56.

Saturday, January 1, 2011

Controlled and sustained gene delivery from injectable, porous PLGA scaffolds

Jeon, O., Krebs, M., & Alsberg, E. (2011). Controlled and sustained gene delivery from injectable, porous PLGA scaffolds. Journal of Biomedical Materials Research Part A, 98 (1), 72–79.

Saturday, January 1, 2011

Controlled and sustained gene delivery from injectable, porous PLGA scaffolds

Jeon, O., Krebs, M., & Alsberg, E. (2011). Controlled and sustained gene delivery from injectable, porous PLGA scaffolds. JOURNAL OF BIOMEDICAL MATERIALS RESEARCH PART A, 98A (1), 72-79.

Saturday, January 1, 2011

Controlled viable release of selectively captured label-free cells in microchannels

Gurkan, U., Anand, T., Tas, H., Elkan, D., Akay, A., Keles, H., ... Demirci, U. (2011). Controlled viable release of selectively captured label-free cells in microchannels. Lab on a Chip, 11 (23), 3979–3989.

Saturday, January 1, 2011

Covana: Precise Identification of Problems in Pex

Xiao, X., Xie, T., Tillmann, N., & De Halleux, J. (2011). Covana: Precise Identification of Problems in Pex. International Conference on Software Engineering (ICSE), Demonstration, (), 1004–1006.

Saturday, January 1, 2011

Cryo-Imaging of 70+Gb Mice: Image Processing/Visualization Challenges and Biotechnology Applications

Wilson, D. L., Gargesha, M., Roy, D., Qutaish, M., Krishnamurthi, G., Sullivant, K., ... Anderson, C. (2011). Cryo-Imaging of 70+Gb Mice: Image Processing/Visualization Challenges and Biotechnology Applications. 2011 8th Ieee International Symposium on Biomedical Imaging: From Nano to Macro, (), 224-229.

Saturday, January 1, 2011

Cyclic versus Staircase Voltammetry in Electrocatalysis: Theoretical Aspects

Hai, B., Tolmachev, Y., Loparo, K. A., Zanelli, C., & Scherson, D. (2011). Cyclic versus Staircase Voltammetry in Electrocatalysis: Theoretical Aspects. Journal of The Electrochemical Society, 158 (2), F15–F19.

Saturday, January 1, 2011

Damage-based Probabilistic Seismic Assessment of RC Frames

Heo, Y., & Kunnath, S. (2011). Damage-based Probabilistic Seismic Assessment of RC Frames. International Conference on Advances in Structural Engineering and Mechanics (ASEM11), ().

Saturday, January 1, 2011

Descending commands to an insect leg controller network cause smooth behavioral transitions

Rutter, B., Taylor, B., Bender, J., Blumel, M., Lewinger, W., Ritzmann, R., ... Quinn, R. D. (2011). Descending commands to an insect leg controller network cause smooth behavioral transitions. , (), 215–220.

Saturday, January 1, 2011

Design and performance of a low-cost acrylic reflector for a 7X concentrating photovoltaic module

Shell, K., Brown, S., Schuetz, M., & Davis, R. (2011). Design and performance of a low-cost acrylic reflector for a 7X concentrating photovoltaic module. , (), 81080A–81080A.

Saturday, January 1, 2011

Detailed characterization of local field potential oscillations and their relationship to spike timing in the antennal lobe of the moth Manduca sexta

Daly, K., Galána, R., Peters, O., & Staudacher, E. (2011). Detailed characterization of local field potential oscillations and their relationship to spike timing in the antennal lobe of the moth Manduca sexta. Bioinspired solutions to the challenges of chemical sensing, (), 50.

Saturday, January 1, 2011

Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models.

Yu, S., Monaco, J., Tomaszewski, J., Shih, N., Feldman, M., & Madabhushi, A. (2011). Detection of prostate cancer on histopathology using color fractals and Probabilistic Pairwise Markov models.. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2011 (), 3427-30.

Saturday, January 1, 2011

Development of a packaging system for clinical evaluation of a nanocomposite-based neural electrode array fabricated from a chemoresponsive polymer substrate

Barnes, A., Hess, A., & Zorman, C. (2011). Development of a packaging system for clinical evaluation of a nanocomposite-based neural electrode array fabricated from a chemoresponsive polymer substrate. , 24 (), 17-25 .

Saturday, January 1, 2011

Development of a stimuli-responsive polymer nanocomposite toward biologically-optimized MEMS-based neural probes

Hess, A., Capadona, J. R., Shanmuganathan, K., Hsu, L., Rowan, S. J., Weder, C., ... Zorman, C. (2011). Development of a stimuli-responsive polymer nanocomposite toward biologically-optimized MEMS-based neural probes. , 21 (), 54009-54017.

Saturday, January 1, 2011

Diamond-on-polymer microelectrode arrays fabricated using a chemical release transfer process

Hess, A., Sabens, D., Martin, H., & Zorman, C. (2011). Diamond-on-polymer microelectrode arrays fabricated using a chemical release transfer process. , 20 (), 867 – 875.

Saturday, January 1, 2011

Differences in breathing patterning during wakefulness in patients with mixed apnea-dominant vs obstructive-dominant sleep apnea

Yamauchi, M., Tamaki, S., Yoshikawa, M., Ohnishi, Y., Nakano, H., Jacono, F., ... Kimura, H. (2011). Differences in breathing patterning during wakefulness in patients with mixed apnea-dominant vs obstructive-dominant sleep apnea. CHEST Journal, 140 (1), 54–61.

Saturday, January 1, 2011

Differences in Breathing Patterning During Wakefulness in Patients With Mixed Apnea-Dominant vs Obstructive-Dominant Sleep ApneaMixed-Dominant vs Obstructive-Dominant Sleep Apnea

Yamauchi, M., Tamaki, S., Yoshikawa, M., Ohnishi, Y., Nakano, H., Jacono, F., ... Kimura, H. (2011). Differences in Breathing Patterning During Wakefulness in Patients With Mixed Apnea-Dominant vs Obstructive-Dominant Sleep ApneaMixed-Dominant vs Obstructive-Dominant Sleep Apnea. CHEST Journal, 140 (1), 54–61.

Saturday, January 1, 2011

Disease gene prioritization based on topological similarity in protein-protein interaction networks

Erten, S., Bebek, G., & Koyutürk, M. (2011). Disease gene prioritization based on topological similarity in protein-protein interaction networks. RECOMB, 15 (), 54-68.

Saturday, January 1, 2011

Drive latencies in hypoglossal motoneurons indicate developmental change in the brainstem respiratory network

Fietkiewicz, C., Loparo, K. A., & Wilson, C. (2011). Drive latencies in hypoglossal motoneurons indicate developmental change in the brainstem respiratory network. Journal of Neural Engineering, 8 (6), 065011.

Saturday, January 1, 2011

Durability of Materials in a Stress-Response Framework: Acrylic Materials for Photovoltaic Systems

Murray, M., & Bruckman, L. (2011). Durability of Materials in a Stress-Response Framework: Acrylic Materials for Photovoltaic Systems. , ().

Saturday, January 1, 2011

ecushion: An etextile device for sitting posture monitoring

Xu, W., Li, Z., Huang, M., Amini, N., & Sarrafzadeh, M. (2011). ecushion: An etextile device for sitting posture monitoring. , (), 194–199.

Saturday, January 1, 2011

Editorial: Scaffold-free cell-based approaches in biomedicine and biotechnology

Gurkan, U., & Xu, F. (2011). Editorial: Scaffold-free cell-based approaches in biomedicine and biotechnology. Biotechnology journal, 6 (12), 1426–1427.

Saturday, January 1, 2011

Effects of age and shear rate on the rheological properties of human yellow bone marrow.

Zhong, Z., & Akkus, O. (2011). Effects of age and shear rate on the rheological properties of human yellow bone marrow.. Biorheology, 48 (2), 89-97.

Saturday, January 1, 2011

Electrospinning alginate-based nanofibers: From blends to crosslinked low molecular weight alginate-only systems

Bonino, C., Krebs, M., Saquing, C., Jeong, S., Shearer, K., Alsberg, E., ... Khan, S. (2011). Electrospinning alginate-based nanofibers: From blends to crosslinked low molecular weight alginate-only systems. Carbohydrate Polymers, 85 (1), 111–119.

Saturday, January 1, 2011

Electrospun Chitosan-Alginate Nanofibers with In Situ Polyelectrolyte Complexation for Use as Tissue Engineering Scaffolds

Jeong, S., Krebs, M., Bonino, C., Samorezov, J., Khan, S., & Alsberg, E. (2011). Electrospun Chitosan-Alginate Nanofibers with In Situ Polyelectrolyte Complexation for Use as Tissue Engineering Scaffolds. TISSUE ENGINEERING PART A, 17 (1-2), 59-70.

Saturday, January 1, 2011

Embryonic stem cell bioprinting for uniform and controlled size embryoid body formation

Xu, F., Sridharan, B., Wang, S., Gurkan, U., Syverud, B., & Demirci, U. (2011). Embryonic stem cell bioprinting for uniform and controlled size embryoid body formation. Biomicrofluidics, 5 (2), 022207.

Saturday, January 1, 2011

Emerging technologies in medical applications of minimum volume vitrification

Zhang, X., Catalano, P., Gurkan, U., Khimji, I., & Demirci, U. (2011). Emerging technologies in medical applications of minimum volume vitrification. Nanomedicine, 6 (6), 1115–1129.

Saturday, January 1, 2011

Enhanced Corrosion Resistance of Interstitially Hardened Stainless Steel: Implications of a Critical Passive Layer Thickness for Breakdown

Heuer, A. H., Kahn, H., Ernst, F., Michal, G., Hovis, D., Rayne, R., ... Natishan, P. (2011). Enhanced Corrosion Resistance of Interstitially Hardened Stainless Steel: Implications of a Critical Passive Layer Thickness for Breakdown. Acta Materialia, 60 (), 716-725.

Saturday, January 1, 2011

Enumeration of CD4+ T-cells using a portable microchip count platform in Tanzanian HIV-infected patients

Moon, S., Gurkan, U., Blander, J., Fawzi, W., Aboud, S., Mugusi, F., ... Demirci, U. (2011). Enumeration of CD4+ T-cells using a portable microchip count platform in Tanzanian HIV-infected patients. PLoS One, 6 (7), e21409.

Saturday, January 1, 2011

Evaluate Virtual Reality Game-based Treatment for Patients with Imbalance and Vestibular Dysfunction

Huang, M., Yeh, S., Chen, S., Wang, P., Su, M., Hung, Y., ... Rizzo, A. (2011). Evaluate Virtual Reality Game-based Treatment for Patients with Imbalance and Vestibular Dysfunction. , ().

Saturday, January 1, 2011

Evaluating feature selection strategies for high dimensional, small sample size datasets.

Golugula, A., Lee, G., & Madabhushi, A. (2011). Evaluating feature selection strategies for high dimensional, small sample size datasets.. Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference, 2011 (), 949-52.

Saturday, January 1, 2011

Ex vivo monitoring of rat heart wall motion using piezoelectric cantilevers

Zhang, W., Chen, Q., Ko, W., Rosenbaum, D., Yu, X., & Feng, P. (2011). Ex vivo monitoring of rat heart wall motion using piezoelectric cantilevers. , (), 868–873.

Pages